biochem package¶
WB1
is a multiwell plate with 1-based coordinates (read well
base-1).
from dscience.biochem.multiwell_plates import WB1
wb1 = WB1(8, 12) # 96-well plate
print(wb1.index_to_label(13)) # prints 'B01'
for well in wb1.block_range('A01', 'H11'):
print(well) # prints 'A01', 'A02', etc.
Getting tissue-specific expression data in humans:
from dscience.biochem.tissue_expression import TissueTable
tissues = TissueTable()
# returns a Pandas DataFrame of expression levels per cell type per gene for this tissue.
tissues.tissue('MKNK2')